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1. 中国水产科学研究院黑龙江水产研究所
2. 大连水产学院生命科学与技术学院
3. 武汉大学生命科学学院
纸质出版日期:2006-04-01,
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[1]孙效文,杨彦豪,龙华,鲁翠云,佟广香,梁利群.白缘(鱼央)微卫星分子标记的筛选[J].武汉大学学报(理学版),2006(04):492-497.
SUN XIAOWEN~1, YANG YANHAO~2, LONG HUA~. Isolation of Microsatellite Markers in Leiobagrus marginatus. [J]. 2006, (4): 492-497.
用磁珠-生物素标记的微卫星探针(ACA)15与白缘缺(Leiobagrus marginatus)基因组酶切片段杂交
捕获含有微卫星序列的DNA片段
连接到T载体中
构建富集微卫星序列的小片段插入文库
再用γ-32P标记的探针进行二次筛选
获得阳性克隆785个
对其中的140个克隆进行了测序
获得完整的微卫星序列132个.用引物设计软件Primer Premier 5.0设计引物64对.对其中的20对引物进行了多态性检测
筛选到稳定扩增的标记13对
用此13对微卫星引物分析了缺属白缘缺(L.marginalus)、拟缘缺(L.marginatoides)(大、小各1种)、黑尾缺(L.nigricauda)共4个群体的遗传多样性
其中10对微卫星引物在种内或种间表现出多态性.
It is a study to isolate microsatellite DNA from Leiobagrus marginatus genome with enrichment by magnetic beads.The genomic DNA was first hybridized with a biotin-labeled SSR(simple sequence repeat) probe(ACA)
15
and then the 400-900 bp DNA fractions containing SSR sequences were captured by magnetic beads coated with streptavadin.The enriched DNA were inserted into pMD-18 T vector and then transformed into E.coli DH5α competent cells.In this experiment
we performed the second screening with a radiolabeled(ACA)
15
probe and obtained 785 positive clones.From 140 positive clones
we isolated 132 microsatellite sequences.This allowed us to designed 64 pairs of primers with the software Primer Premier 5.0.13 microsatellite markers had amplified stably.Using the 13 pairs of primers amplified 4 populations of L.marginalus
L.marginatoides(big size and small size)
L.nigricauda.10 markers showed polymorphism among them.The genetic diversity of these 4 populations was analyzed(using) the 10 markers.
白缘(鱼央)微卫星分子标记群体分析
Leiobagrus marginatusmicrosatellites markerpopulation analysis
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